org.utgenome.shell.db
Class Locus

java.lang.Object
  extended by org.utgenome.shell.db.Locus
All Implemented Interfaces:
java.io.Serializable
Direct Known Subclasses:
CDS, Exon, Gene

public class Locus
extends java.lang.Object
implements java.io.Serializable

Locus on a genome sequence

Author:
leo
See Also:
Serialized Form

Field Summary
 java.lang.String color
           
 long end
           
 java.lang.String name
           
 long start
           
 java.lang.String strand
           
 
Constructor Summary
Locus()
           
Locus(long start, long end)
           
Locus(java.lang.String name, long start, long end)
           
 
Method Summary
 java.lang.String getColor()
           
 long getEnd()
           
 java.lang.String getName()
           
 long getStart()
           
 java.lang.String getStrand()
           
 void setColor(java.lang.String color)
           
 void setEnd(long end)
           
 void setName(java.lang.String name)
           
 void setStart(long start)
           
 void setStrand(java.lang.String strand)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

name

public java.lang.String name

start

public long start

end

public long end

strand

public java.lang.String strand

color

public java.lang.String color
Constructor Detail

Locus

public Locus()

Locus

public Locus(long start,
             long end)

Locus

public Locus(java.lang.String name,
             long start,
             long end)
Method Detail

getName

public java.lang.String getName()

setName

public void setName(java.lang.String name)

getStart

public long getStart()

setStart

public void setStart(long start)

getEnd

public long getEnd()

setEnd

public void setEnd(long end)

getStrand

public java.lang.String getStrand()

setStrand

public void setStrand(java.lang.String strand)

getColor

public java.lang.String getColor()

setColor

public void setColor(java.lang.String color)


Creative Commons License
This work is licensed under a Creative Commons Attribution-ShareAlike 2.1 Japan License.