The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:
| GroupId | ArtifactId | Version | Type | 
|---|---|---|---|
| org.apache.ant | ant | 1.7.1 | jar | 
| org.apache.tomcat | catalina | 6.0.29 | jar | 
| org.apache.tomcat | coyote | 6.0.29 | jar | 
| org.apache.tomcat | el-api | 6.0.29 | jar | 
| org.apache.tomcat | jasper | 6.0.29 | jar | 
| org.utgenome | utgb-core | 1.5.1-SNAPSHOT | jar | 
| org.xerial | sqlite-jdbc | 3.7.2 | jar | 
| org.xerial | xerial-core | 2.0.1 | jar | 
| org.xerial | xerial-lens | 2.0 | jar | 
| org.xerial.thirdparty | svnkit | 1.3.0.5847 | jar | 
The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:
| GroupId | ArtifactId | Version | Type | 
|---|---|---|---|
| junit | junit | 4.8.1 | jar | 
The following is a list of transitive dependencies for this project. Transitive dependencies are the dependencies of the project dependencies.
The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:
| GroupId | ArtifactId | Version | Type | 
|---|---|---|---|
| antlr | antlr | 2.7.7 | jar | 
| com.allen_sauer.gwt | gwt-dnd | 2.6.5 | jar | 
| com.google.gwt.gears | gwt-google-apis | 1.0.0 | jar | 
| commons-fileupload | commons-fileupload | 1.2 | jar | 
| log4j | log4j | 1.2.9 | jar | 
| org.antlr | antlr | 3.2 | jar | 
| org.antlr | antlr-runtime | 3.2 | jar | 
| org.antlr | stringtemplate | 3.2 | jar | 
| org.apache.ant | ant-launcher | 1.7.1 | jar | 
| org.apache.tomcat | annotations-api | 6.0.29 | jar | 
| org.apache.tomcat | jasper-el | 6.0.29 | jar | 
| org.apache.tomcat | jasper-jdt | 6.0.29 | jar | 
| org.apache.tomcat | jsp-api | 6.0.29 | jar | 
| org.apache.tomcat | juli | 6.0.29 | jar | 
| org.apache.tomcat | servlet-api | 6.0.29 | jar | 
| org.utgenome.thirdparty | gwt-incubator | 20100204-r1747 | jar | 
| org.utgenome.thirdparty | picard | 1.35 | jar | 
| org.utgenome.thirdparty | sam | 1.35 | jar | 
| org.xerial | xerial-json | 2.0 | jar | 
| org.xerial | xerial-silk | 2.0 | jar | 
| org.xerial | xerial-storage | 2.0 | jar | 
| org.xerial | xerial-xml | 2.0 | jar | 
| xpp3 | xpp3 | 1.1.4c | jar | 
The following is a list of runtime dependencies for this project. These dependencies are required to run the application:
| GroupId | ArtifactId | Version | Type | 
|---|---|---|---|
| com.google.gwt | gwt-servlet | 2.0.4 | jar | 






















































Apache Software License, version 1.1: MXP1: Xml Pull Parser 3rd Edition (XPP3)
Public Domain: MXP1: Xml Pull Parser 3rd Edition (XPP3)
Apache 2: UTGB Core, UTGB Shell
Unknown: ANTLR Grammar Tool, Antlr 3 Runtime, Unnamed - com.allen_sauer.gwt:gwt-dnd:jar:2.6.5, Unnamed - com.google.gwt.gears:gwt-google-apis:jar:1.0.0, Unnamed - log4j:log4j:jar:1.2.9, Unnamed - org.apache.ant:ant-launcher:jar:1.7.1, Unnamed - org.apache.tomcat:annotations-api:jar:6.0.29, Unnamed - org.apache.tomcat:catalina:jar:6.0.29, Unnamed - org.apache.tomcat:coyote:jar:6.0.29, Unnamed - org.apache.tomcat:el-api:jar:6.0.29, Unnamed - org.apache.tomcat:jasper-el:jar:6.0.29, Unnamed - org.apache.tomcat:jasper-jdt:jar:6.0.29, Unnamed - org.apache.tomcat:jasper:jar:6.0.29, Unnamed - org.apache.tomcat:jsp-api:jar:6.0.29, Unnamed - org.apache.tomcat:juli:jar:6.0.29, Unnamed - org.apache.tomcat:servlet-api:jar:6.0.29, Unnamed - org.utgenome.thirdparty:gwt-incubator:jar:20100204-r1747, Unnamed - org.utgenome.thirdparty:picard:jar:1.35, Unnamed - org.utgenome.thirdparty:sam:jar:1.35, Unnamed - org.xerial.thirdparty:svnkit:jar:1.3.0.5847, org.apache.tools.ant
BSD License: AntLR Parser Generator
BSD licence: ANTLR StringTemplate
Common Public License Version 1.0: JUnit
The Apache Software License, Version 2.0: FileUpload, GWT Servlet Library 2.0, SQLite JDBC, Xerial Core, Xerial JSON Library, Xerial Lens Library, Xerial Silk Library, Xerial Storage, Xerial XML Library
Indiana University Extreme! Lab Software License, vesion 1.1.1: MXP1: Xml Pull Parser 3rd Edition (XPP3)
| Filename | Size | Entries | Classes | Packages | JDK Rev | Debug | 
|---|---|---|---|---|---|---|
| antlr-2.7.7.jar | 434.85 kB | 239 | 224 | 12 | 1.2 | debug | 
| gwt-dnd-2.6.5.jar | 117.65 kB | 112 | 53 | 4 | 1.5 | debug | 
| gwt-servlet-2.0.4.jar | 1.50 MB | 1,590 | 1,507 | 54 | 1.5 | debug | 
| gwt-google-apis-1.0.0.jar | 35.75 kB | 43 | 12 | 5 | 1.4 | debug | 
| commons-fileupload-1.2.jar | 51.84 kB | 57 | 40 | 5 | 1.3 | debug | 
| junit-4.8.1.jar | 231.49 kB | 267 | 230 | 30 | 1.5 | debug | 
| log4j-1.2.9.jar | 344.03 kB | 273 | 244 | 18 | 1.1 | debug | 
| antlr-3.2.jar | 874.14 kB | 331 | 212 | 7 | 1.5 | debug | 
| antlr-runtime-3.2.jar | 148.43 kB | 122 | 109 | 4 | 1.4 | debug | 
| stringtemplate-3.2.jar | 167.99 kB | 83 | 81 | 4 | 1.4 | debug | 
| ant-1.7.1.jar | 1.26 MB | 818 | 769 | 29 | 1.2 | debug | 
| ant-launcher-1.7.1.jar | 11.86 kB | 12 | 5 | 1 | 1.2 | debug | 
| annotations-api-6.0.29.jar | 14.88 kB | 32 | 21 | 5 | 1.5 | debug | 
| catalina-6.0.29.jar | 1.14 MB | 609 | 538 | 25 | 1.5 | debug | 
| coyote-6.0.29.jar | 740.37 kB | 400 | 353 | 25 | 1.5 | debug | 
| el-api-6.0.29.jar | 31.62 kB | 32 | 25 | 1 | 1.5 | debug | 
| jasper-6.0.29.jar | 512.70 kB | 276 | 247 | 12 | 1.5 | debug | 
| jasper-el-6.0.29.jar | 106.03 kB | 83 | 71 | 4 | 1.5 | debug | 
| jasper-jdt-6.0.29.jar | 1.34 MB | 446 | 388 | 15 | 1.2 | debug | 
| jsp-api-6.0.29.jar | 74.90 kB | 78 | 60 | 3 | 1.5 | debug | 
| juli-6.0.29.jar | 25.86 kB | 22 | 14 | 2 | 1.5 | debug | 
| servlet-api-6.0.29.jar | 86.16 kB | 63 | 42 | 2 | 1.5 | debug | 
| utgb-core-1.5.1-SNAPSHOT.jar | 1.86 MB | 1,518 | 933 | 64 | 1.5 | debug | 
| gwt-incubator-20100204-r1747.jar | 2.28 MB | 2,121 | 1,303 | 83 | 1.5 | debug | 
| picard-1.35.jar | 719.01 kB | 219 | 203 | 12 | 1.6 | debug | 
| sam-1.35.jar | 500.47 kB | 155 | 147 | 4 | 1.6 | debug | 
| sqlite-jdbc-3.7.2.jar | 3.05 MB | 179 | 123 | 3 | 1.5 | debug | 
| xerial-core-2.0.1.jar | 328.82 kB | 268 | 238 | 19 | 1.6 | debug | 
| xerial-json-2.0.jar | 71.73 kB | 61 | 46 | 2 | 1.6 | debug | 
| xerial-lens-2.0.jar | 322.06 kB | 236 | 205 | 14 | 1.6 | debug | 
| xerial-silk-2.0.jar | 198.18 kB | 133 | 112 | 6 | 1.6 | debug | 
| xerial-storage-2.0.jar | 134.79 kB | 143 | 119 | 15 | 1.6 | debug | 
| xerial-xml-2.0.jar | 75.84 kB | 69 | 54 | 6 | 1.6 | debug | 
| svnkit-1.3.0.5847.jar | 1.75 MB | 806 | 744 | 28 | 1.2 | debug | 
| xpp3-1.1.4c.jar | 117.25 kB | 78 | 56 | 13 | 1.1 | debug | 
| Total | Size | Entries | Classes | Packages | JDK Rev | Debug | 
| 35 | 20.52 MB | 11,974 | 9,528 | 536 | 1.6 | 35 | 
| compile: 33 | compile: 18.79 MB | compile: 10,117 | compile: 7,791 | compile: 452 | - | compile: 33 | 
| test: 1 | test: 231.49 kB | test: 267 | test: 230 | test: 30 | - | test: 1 | 
| runtime: 1 | runtime: 1.50 MB | runtime: 1,590 | runtime: 1,507 | runtime: 54 | - | runtime: 1 | 
| Repo ID | URL | Release | Snapshot | 
|---|---|---|---|
| apache.snapshots | http://people.apache.org/repo/m2-snapshot-repository | - | Yes | 
| xerial-snapshot | http://www.xerial.org/maven/repository/snapshot | Yes | Yes | 
| utgb | http://maven.utgenome.org/repository/artifact | Yes | Yes | 
| sonatype-nexus-snapshots | http://oss.sonatype.org/content/repositories/snapshots | - | Yes | 
| utgb-snapshot | http://maven.utgenome.org/repository/snapshot | Yes | Yes | 
| xerial | http://www.xerial.org/maven/repository/artifact | Yes | Yes | 
| antlr-snapshot | http://antlr.org/antlr-snapshot | Yes | Yes | 
| central | http://repo1.maven.org/maven2 | Yes | - | 
| apache.org | http://people.apache.org/repo/m2-snapshot-repository | - | Yes | 
Repository locations for each of the Dependencies.